Molecular & Biological Communications

Publications 

135. S. Ozcan, O. B. Akan, "A Molecular Communication Channel Model for Early Epileptic Seizure Detection via Synaptic Glutamate Dynamics," submitted to IEEE Transactions on NanoBioscience, May 2026.

134. M. Sahin and O. B. Akan, "Local Differential Privacy for Molecular Communication Networks," submitted to IEEE Transactions on NanoBioscience, 2026.

133. C. Koca and O. B. Akan, "A Three-dimensional Model for Partially Absorbing Boundaries in Synaptic Molecular Communications,"submitted to IEEE Transactions on Molecular, Biological, and Multi-Scale Communications, May 2026.

132. C. Koca and O. B. Akan, "Modelling 1D Partially Absorbing Boundaries for Brownian Molecular Communication Channels," submitted to IEEE Transactions on Molecular, Biological, and Multi-Scale Communications, May 2026.

131. M. Sahin and O. B. Akan, "Low-Complexity Run-Length-Limited ISI-Mitigation (RLIM) Codes for Molecular Communication," submitted to IEEE Transactions on Molecular, Biological, and Multi-Scale Communications, 2026.

130. S. Zhang and O. B. Akan, "Dispersion-Domain Detection for Mobile Molecular Communication Under Multiplicative Geometry Uncertainty," submitted to IEEE Transactions on Communications, April 2026.

129. H. Ni and O. B. Akan, "A Control-Referenced Tri-Channel OECT Receiver for Hybrid Molecular Communication Toward Brain Organoid Interfaces," submitted to IEEE Transactions on Molecular, Biological, and Multi-Scale Communications, April 2026.

128. S. Zhang and O. B. Akan, "Chemo-Hydrodynamic Transceivers for the Internet of Bio-Nano Things" IEEE Internet of Things Journal (Early Access), doi: 10.1109/JIOT.2026.3689994 2026.

127. D. Aktas and O. B. Akan, "Flexure-FET-Based Receiver with Competitive Binding for Interference Mitigation in Molecular Communication," IEEE Transactions on Molecular, Biological, and Multi-Scale Communications (Early Access), doi: 10.1109/TMBMC.2026.3690065,  2026.

126. F. E. Bilgen and O. B. Akan, "Continuous Blood Monitoring with Particle-based Integrated Sensing and Communication (ISAC)," to appear in IEEE Nanotechnology Magazine, 2026.

125. S. Zhang and O. B. Akan, "Ion Transmitter for Molecular Communication," to appear in IEEE Transactions on NanoBioscience, 2026.

124. A. B. Kilic, F. E. Bilgen, and O. B. Akan, "Channel Modeling and Experimental Validation of Odor-Based Molecular Communication Systems," in Proc. 10th Workshop on Molecular Communications, 2026.

123. B. Maitra, M. Kuşcu, and O. B. Akan, "Information Theoretic Modeling of Interspecies Molecular Communication," in Proc. 10th Workshop on Molecular Communications, 2026.

122. B. Kılıç and O. B. Akan, "Neural-Inspired Multi-Agent Molecular Communication Networks for Collective Intelligence," in Proc. 10th Workshop on Molecular Communications, 2026.

121. A. S. Okcu, M. E. B., and O. B. Akan, "Physical Limits of Proximal Tumor Detection via MAGE-A Extracellular Vesicles," in Proc. 10th Workshop on Molecular Communications, 2026.

120. F. Merdan and O. B. Akan, "Intrinsic MIMO Particle Communication Channel with Random Advection," in Proc. 10th Workshop on Molecular Communications, 2026.

119. A. S. Okcu, O. T. Baydas, and O. B. Akan, "Private and Robust Biochemical Sensing-Based Diagnostics for the Internet of Medical Things," March 2026.

118. F. Merdan and O. B. Akan, "Odor Communication with Green Leaf Volatiles for Stress Signalling in the Internet of Plants," submitted to IEEE Transactions on Molecular, Biological, and Multi-Scale Communications, February 2026.

117. F. Merdan and O. B. Akan, "An Acoustic Communication Model in Plants," submitted to IEEE Transactions on Molecular, Biological, and Multi-Scale Communications, 2026.

116. F. Merdan and O. B. Akan, "Airborne Particle Communication Through Time-varying Diffusion-Advection Channels," submitted to IEEE Transactions on Communications, 2026.

115. S. Zhang and O. B. Akan, "Chemo-Hydrodynamic Transceivers for the Internet of Bio-Nano Things: Modeling the Joint Propulsion-Transmission Trade-off," submitted to IEEE Internet of Things Journal, February 2026.

114. O. T. Baydas, E. Yatgin, and O. B. Akan, "Information Transmission in Quorum Sensing for Gut Microbiome," IEEE Transactions on Molecular, Biological, and Multi-Scale Communications, 2026. 

113. B. E. Ortlek and O. B. Akan, "Gut-Brain Axis as a Closed-Loop Molecular Communication Network," IEEE Transactions on Molecular, Biological, and Multi-Scale Communications, 2026.

112. D. Aktas, and O. B. Akan, "A Cylindrical Nanowire Array-Based Flexure-FET Receiver for Molecular Communication," IEEE Transactions on Molecular, Biological, and Multi-Scale Communications, 2026. 

111. M. Sahin and O. B. Akan, "Run-Length-Limited ISI-Mitigation (RLIM) Coding for Molecular Communication," IEEE Transactions on Molecular, Biological, and Multi-Scale Communications, 2026.

110. A. S. Okcu and O. B. Akan, "PLOS-RS: Probabilistic Localization of Odor Sources via Random Search," in Proc. IEEE INFOCOM 2026, Tokyo, Japan, May 2026.

109. B. A. Kilic and O. B. Akan, "Multi Ratio Shift Keying (MRSK) Modulation for Molecular Communication," IEEE Transactions on Communications, vol. 73, no. 10, pp. 8873-8885, October 2025.

108. S. H. Zulfiqar, and O. B. Akan, "Molecular Communication-Based Quorum Sensing Disruption for Enhanced Immune Defense," IEEE Transactions on NanoBioscience, vol. 25, no. 1, pp. 23-32, January 2026.

107. B. E. Ortlek and O. B. Akan, "Modeling and Analysis of SCFA-Driven Vagus Nerve Signaling in the Gut-Brain Axis via Molecular Communication," IEEE Transactions on Molecular, Biological, and Multi-Scale Communications, vol. 11, no. 4, pp. 588-599, July 2025.

106. A. Kilic, and O. B. Akan, "End-to-End Mathematical Modeling of Stress Communication Between Plants," IEEE Transactions on Molecular, Biological, and Multi-Scale Communications, vol. 12, pp. 69-78, October 2025.

105. H. Ni and O. B. Akan, "ART-Rx: A Proportional-Integral-Derivative (PID) Controlled Adaptive Real-Time Threshold Receiver for Molecular Communication," IEEE Transactions on Molecular, Biological, and Multi-Scale Communications, vol. 11, no. 3, pp. 435-450, June 2025.

104. B.Y. Koca, O. B. Akan, "Bacterial Communications and Computing in Internet of Everything (IoE)," IEEE Communications Surveys & Tutorials, vol. 27, no. 3, pp. 1839-1866, June 2025.

103. N. FallahBagheri, O. B. Akan, "A Molecular Communication Perspective of Alzheimer’s Disease: Impact of Amyloid Beta Oligomers on Glutamate Diffusion in the Synaptic Cleft," IEEE Transactions on Molecular, Biological, and Multi-Scale Communications, vol. 11, no. 2, pp. 186-200, June 2025.

102. E. Baradari, O. B. Akan, "Molecular Communication-Based Intelligent Dopamine Rate Modulator for Parkinson's Disease Treatment," in IEEE Transactions on Nanobioscience, vol. 24, no. 2, pp. 136-144, April 2025.

101. F. E. Bilgen, A. B. Kilic, O. B. Akan, "Odor Perceptual Shift Keying (OPSK) for Odor-based Molecular Communication," IEEE Transactions on Molecular, Biological and Multi-Scale Communications, vol. 11, no. 1, pp. 1-12, March 2025.

100. S. Zhang, O. B. Akan, "3D Receiver for Molecular Communications in Internet of Organoids," IEEE Transactions on Molecular, Biological and Multi-Scale Communications, vol.11, no. 1, pp. 91-100, March 2025.

99. M. Sahin, B. E. Ortlek, O. B. Akan, "Molecular Arithmetic Coding (MoAC) and Optimized Molecular Prefix Coding (MoPC) for Diffusion-Based Molecular Communication," IEEE Transactions on Molecular, Biological and Multi-Scale Communications, vol. 11, no. 1, pp. 66-77, March 2025.

98. S. Zhang and O. B. Akan, "Joint Diffusion-Based Molecular Communication and Self-Sensing for Channel-Adaptive Transmission," submitted to IEEE Transactions on Communications, 2025.

97. A. Kilic, O. B. Akan, et al., "Information and Communication Theoretical Foundations of the Internet of Plants, Principles, Challenges, and Future Directions," submitted to IEEE Communications Surveys and Tutorials, 2025.

96. C. Koca, M. Ozger, O. Cetinkaya, O. B. Akan, "Information-theoretic Lifetime Maximization for IoBNT-enabled Sensing," IEEE Transactions on Molecular, Biological, and Multi-Scale Communications, vol. 11, no. 4, pp. 509-514, December 2025.

95. H. Cai and O. B. Akan, "Semantic Learning for Molecular Communication in Internet of Bio-Nano Things," in Proc. 9th International Workshop on Molecular Communications, Catania, Italy, April 2025.

94. B. Maitra and O. B. Akan, "Modeling and Analysis of VOC-based Interplant Molecular Communication Channel," submitted to IEEE Transactions on Molecular, Biological, and Multi-Scale Communications, 2025.

93. A. S. Okcu, O. B. Akan, "Smell of Source: Learning-Based Odor Source Localization with Molecular Communication", 2025.

92. B. Maitra, O. B. Akan, "Molecular Quantum (MolQ) Communication Channel in the Gut-Brain Axis Synapse," IEEE Transactions on Molecular, Biological and Multi-Scale Communications, vol. 10, no. 4, pp. 604-612, December 2024.

91. F. E. Bilgen, O. B. Akan, "Mycorrhizal Fungi and Plant Symbiosis for Energy Harvesting in the Internet of Plants," in Proc. ACM NanoCom 2024, Milan, Italy, October 2024.

90. D. Aktas, B. E. Ortlek, M. Civas, E. Baradari, A. B. Kilic, F. E. Bilgen, A. S. Okcu, M. Whitfield, O. Cetinkaya, and O. B. Akan, "Odor-Based Molecular Communications: State-of-the-Art, Vision, Challenges, and Frontier Directions," IEEE Communications Surveys & Tutorials, vol. 27, no. 1, pp. 696-731, First quarter 2025.

89. M. Civas, M. Kuscu, O. B. Akan, "Frequency-Domain Detection for Molecular Communication with Cross-Reactive Receptors," IEEE Transactions on Communications, vol. 72, no. 8, pp. 4741-4755, August 2024.

88. A. Powari, O.B. Akan, "Odor Intensity Shift Keying (OISK) and Channel Capacity of Odor-based Molecular Communications in Internet of Everything," IEEE Transactions on Molecular, Biological and Multi-Scale Communications, vol. 10, no. 3, pp. 396-408, May 2024.

87. H. Xiao, K. Dokaj, O. B. Akan, "What Really is 'Molecule' in Molecular Communications? The Quest for Physics of Particle-based Information Carriers," IEEE Transactions on Molecular, Biological and Multi-Scale Communications, vol. 10, no. 1, pp. 43-74, March 2024.

86. O. T. Baydas, O. B. Akan, "Received Signal and Channel Parameter Estimation in Molecular Communications," IEEE Transactions on Molecular, Biological and Multi-Scale Communications, vol. 10, no. 1, pp. 92-97, March 2024.

85. A. Z. Babar, O. B. Akan, "Sustainable and Precision Agriculture with the Internet of Everything (IoE)", 2024.

84. S. Zhang, O. B. Akan, "Internet of Organoids - Bridging IoT with the Future of Organoid Research", 2024.

83. O. B. Akan, E. Dinc, M. Kuscu, O. Cetinkaya, B. A. Bilgin, "Internet of Everything (IoE) - From Molecules to the Universe," IEEE Communications Magazine, vol. 61, no. 10, pp. 122-128, October 2023.

82. C. Koca, O. B. Akan, "A Fast Simulation Algorithm for Molecular Dispersion and Binding in Molecular Communications," in Proc. ACM NanoCom 2023, Coventry, UK, September 2023.

81. M. Civas, M. Kuscu, O. Cetinkaya, B. E. Ortlek, O. B. Akan, "Graphene and Related Materials for the Internet of Bio-Nano Things," APL Materials, vol. 11, no. 8, pp. 080901, August 2023.

80. B. E. Ortlek, O. B. Akan, "Communication Theoretical Analysis of P-Cresol Signaling in Gut-Brain Axis with Autism Spectrum Disorder," in Proc. IEEE ICC 2023, Rome, Italy, May 2023.

79. M. Civas, A. Abdali, M. Kuscu, O. B. Akan, "Frequency-Domain Detection for Molecular Communications," in Proc. IEEE ICC 2023, Rome, Italy, May 2023.

78. O. T. Baydas, O. Cetinkaya, O. B. Akan, "Estimation and Detection for Molecular MIMO Communications in the Internet of Bio-Nano Things", IEEE Transactions on Molecular, Biological and Multi-Scale Communications, vol. 9, no. 1, pp. 106-110, March 2023.

77. C. Koca, O. B. Akan, "Channel Clearance by Perfectly Absorbing Boundaries in Synaptic Molecular Communications", IEEE Access, vol. 10, pp. 121480-121493, November 2022.

76. D. Aktas, O. B. Akan, "Weight Shift Keying (WSK) with Practical Mechanical Receivers for Molecular Communications in Internet of Everything", IEEE Journal on Selected Areas in Communications, vol. 40, no. 11, pp. 3285-3294, October 2022.

75. N. A. Turgut, B. A. Bilgin, O. B. Akan, "N4Sim: The first Nervous NaNoNetwork Simulator accounting for Synaptic Molecular Communications", IEEE Transactions on Nanobioscience, vol. 21, no. 4, pp. 468-481, October 2022.

74. C. Koca, M. Civas, O. B. Akan, "Narrow Escape Problem in Synaptic Molecular Communications," in Proc. ACM NanoCom 2022, Barcelona, Spain, October 2022.

73. A. Das, B. Runwal, T. Baydas, O. Cetinkaya, O. B. Akan, "Received Signal Modeling and BER Analysis for Molecular SISO Communications," in Proc. ACM NanoCom 2022, Barcelona, Spain, October 2022.

72. T. Khan, O. B. Akan, "Communication Theoretical Modeling and Analysis of Tripartite Synapses with Astrocytes in Synaptic Molecular Communication", IEEE Transactions on Molecular, Biological, and Multi-Scale Communications, vol. 8, no. 8, pp. 169-177, September 2022.

71. M. Civas, O. B. Akan, "Molecular Communication Transmitter Architectures for the Internet of Bio-Nano Things," in Proc. BalkanCom 2022, Sarajevo, Bosnia and Herzegovina, August 2022.

70. M. Kuscu, O. B. Akan, "Detection in Molecular Communications with Ligand Receptors under Molecular Interference", Digital Signal Processing (Elsevier), vol. 124, pp. 103186, May 2022.

69. M. Civas, O. Cetinkaya, M. Kuscu, O. B. Akan, "Universal Transceivers: Opportunities and Future Directions for the Internet of Everything (IoE)", Frontiers in Communications and Networks, vol. 2, pp. 50, September 2021.

68. M. Kuscu, H. Ramezani, E. Dinc, S. Akhavan, O. B. Akan, "Fabrication and Microfluidic Analysis of Graphene-based Molecular Communication Receiver for Internet of Nano Things (IoNT)", Nature Scientific Reports, vol. 11, no. 1, pp. 19600, September 2021.

67. C. Koca, M. Civas, S. Sahin, O. Ergonul, O. B. Akan, "Molecular Communication Theoretical Modeling and Analysis of SARS-CoV2 Transmission in Human Respiratory System," IEEE Transactions on Molecular, Biological, and Multi-Scale Communications, vol. 7, no. 3, pp. 153 - 164, September 2021.

66. D. Aktas, O. B. Akan, "A Mechanical Transduction-Based Molecular Communication Receiver for Internet of Nano Things (IoNT)," in Proc. ACM NanoCom 2021, Virtual Conference, September 2021.

65. C. Koca, M. Civas, O. B. Akan, "Evolutionary Game Theoretic Resource Allocation Simulation for Molecular Communication," ITU Journal on Future and Evolving Technologies, vol. 2, no.3, July 2021.

64. C. Koca, O. Ergul, M. Civas, O. B. Akan, "Information Theoretic Modeling of Paranodal Regions in Myelinated Axons," ITU Journal on Future and Evolving Technologies, vol. 2, no.3, July 2021.

63. O. B. Akan, H. Ramezani, M. Civas, O. Cetinkaya, B. A. Bilgin, N. A. Abbasi, "Information and Communication Theoretical Understanding and Treatment of Spinal Cord Injuries: State-of-the-art and Research Challenges," in IEEE Reviews in Biomedical Engineering, vol. 16, pp. 332-347, February 2021.

62. M. Civas, O. B. Akan, "Rate of Information Flow Across Layered Neuro-spike Network in the Spinal Cord," IEEE Transactions on Nanobioscience,vol. 19, no.3, pp. 368 - 377, July 2020.

61. T. Khan, H. Ramezani, N. A. Abbasi, O. B. Akan, "Impact of Long Term Plasticity on Information Transmission over Neuronal Networks," in IEEE Transactions on Nanobioscience, vol. 19, no. 1, pp. 25-34, January 2020.

60. M. Kuscu, O. B. Akan, "Channel Sensing in Molecular Communications with Single Type of Ligand Receptors," IEEE Transactions on Communications, vol. 67, no. 10, pp. 6868-6884, October 2019.

59. M. Kuscu, E. Dinc, B. A. Bilgin, H. Ramezani, O. B. Akan, "Transmitter and Receiver Architectures for Molecular Communications: A Survey on Physical Design with Modulation, Coding and Detection Techniques," Proceedings of the IEEE, vol. 107, no. 7, pp. 1302-1341, July 2019.

58. T. Khan, O. B. Akan, "Sum Rate Analysis of Multiple-Access Neuro-Spike Communication Channel with Dynamic Spiking Threshold," Nano Communication Networks Journal (Elsevier), vol. 19, pp. 110-18, March 2019.

57. T. Khan, M. Civas, O. Cetinkaya, N. A. Abbasi, O. B. Akan, "Nanosensor Networks for Smart Health Care," in Nanosensors for Smart Cities, Edited by B. Han, V. Tomer, T. Nguyen, A. Farmani, P. K. Singh, Elsevier, 2019.

56. E. Dinc, M. Kuscu, B. A. Bilgin, O. B. Akan, "Internet of Everything - A Unifying Framework beyond Internet of Things," in Harnessing the Internet of Everything (IoE) for Accelerated Innovation Opportunities, Edited by P. J. S. Cardoso, J. Monteiro, J. Semiao, and J. M. F. Rodrigues, IGI Global, 2019.

55. B. A. Bilgin, E. Dinc, O. B. Akan, "DNA-based Molecular Communications," IEEE Access, Vol. 6, no. 1, pp. 73119 - 73129, December 2018.

54. M. Civas, O. B. Akan, "An Information Theoretical Analysis of Multi-terminal Neuro-spike Communication Network in Spinal Cord," in Proc. ACM/IEEE NanoCom, Reykjavik, Iceland, September 2018.

53. H. Ramezani, T. Khan, O. B. Akan, "Sum Rate of MISO Neuro-spike Communication Channel with Constant Spiking Threshold," IEEE Transactions on Nanobioscience, vol. 17, no.3, pp. 342-351, July 2018.

52. H. Ramezani, O. B. Akan, "Impacts of Spike Shape Variations on Synaptic Communication," IEEE Transactions on Nanobioscience, vol. 17, no. 3, pp. 260-271, July 2018.

51. C. Koca, E. Dinc, H. Ramezani, O. B. Akan, "Performance Analysis for Capacitive Electrical Neural Interfaces," in Proc. IEEE NANO, Cork, Ireland, July 2018.

50. T. Khan, H. Ramezani, G. Muzio, O. B. Akan, "Analysis of Information Flow in MISO Neuro-spike Communication Channel with Synaptic Plasticity," in Proc. IEEE NANO, Cork, Ireland, July 2018.

49. G. Muzio, M. Kuscu, O. B. Akan, "Selective Signal Detection with Ligand Receptors under Interference in Molecular Communications," in Proc. IEEE SPAWC 2018, Kalamata, Greece, June 2018.

48. H. Ramezani, T. Khan, O. B. Akan, "Information Theoretical Analysis of Synaptic Communication for Nanonetworks," in Proc. IEEE INFOCOM 2018, Honolulu, USA, April 2018.

47. M. Kuscu, O. B. Akan, "Maximum Likelihood Detection with Ligand Receptors for Diffusion-Based Molecular Communications in Internet of Bio-Nano Things," IEEE Transactions on Nanobioscience, vol. 17, no. 1, pp. 44-54, March 2018.

46. N. A. Abbasi, D. Lafci, O. B. Akan, "Controlled Information Transfer Through An In Vivo Nervous System," Nature Scientific Reports, vol. 8, pp. 2298, February 2018.

45. M. Kuscu, O. B. Akan, "Modeling Convection-Diffusion-Reaction Systems for Microfluidic Molecular Communications with Surface-based Receivers in Internet of Bio-Nano Things," PLOS One, vol. 13, no. 2, p. e0192202, Feb 2018.

44. H. Ramezani, O. B. Akan, "Information Capacity of Vesicle Release in Neuro-spike Communication," IEEE Communications Letters, vol. 22, no. 1, pp. 41-44, January 2018.

43. H. Ramezani, O. B. Akan, "Information Capacity of SISO Neuro-spike Communication Channel under Axonal Noise," 2018.

42. H. Ramezani, T. Khan, E. Dinc, O. B. Akan, "Neuronal Communication Channels," in Encyclopedia of Wireless Networks, Edited by S. Shen, X. Lin, K. Zhang, Springer, 2018.

41. E. B. Pehlivanoglu, B. D. Unluturk, O. B. Akan, "Modulation in Molecular Communications: A Look on Methodologies," in Modeling, Methodologies and Tools for Molecular and Nano-scale Communications, Edited by J. Suzuki, T. Nakano and M. J. Moore, Springer, 2017.

40. N. A. Abbasi, O. B. Akan, "An Information Theoretical Analysis of Molecular Communications in Human Insulin-Glucose System for Internet of Bio-Nano Things," IEEE Transactions on Nanobioscience, vol. 16, no. 8, pp. 783-791, December 2017.

39. C. Koca, O. B. Akan, "Anarchy vs. Cooperation on Internet of Molecular Things," IEEE Internet of Things Journal, vol. 4, no. 5, pp. 1445-1453, October 2017.

38. B. A. Bilgin, O. B. Akan, "A Fast Algorithm for Analysis of Molecular Communication in an Artificial Synapse," IEEE Transactions on Nanobioscience, vol. 16, no. 6, pp. 408-417, September 2017.

37. H. Ramezani, H. Khaki, E. Erzin, O. B. Akan, "Speech Features for Telemonitoring of Parkinson's Disease Symptoms," in Proc. IEEE EMBC 2017, JeJu Island, S. Korea, July 2017.

36. H. Ramezani, O. B. Akan, "Importance of Vesicle Release Stochasticity in Neuro-spike Communication," in Proc. IEEE EMBC 2017, JeJu Island, S. Korea, July 2017.

35. H. Ramezani, C. Koca, O. B. Akan, "Rate Region Analysis of Multi-terminal Neuronal Nanoscale Molecular Communication Channel," in Proc. IEEE Nano 2017, Pittsburgh, USA, July 2017.

34. T. Khan, B. A. Bilgin, O. B. Akan, "Diffusion-based Model for Synaptic Molecular Communication Channel," IEEE Transactions on Nanobioscience, vol. 16, no. 4, pp. 299-308, June 2017.

33. E. Dinc, O. B. Akan, "Theoretical Limits on Multiuser Molecular Communication in Internet of Nano-Bio Things,” IEEE Transactions on Nanobioscience, vol. 16, no. 4, pp. 266-270, June 2017.

32. H. Ramezani, O. B. Akan, "A Communication Theoretical Modeling of Axonal Propagation in Hippocampal Pyramidal Neurons," IEEE Transactions on Nanobioscience, vol. 16, no. 4, pp. 248-256, June 2017.

31. O. B. Akan, H. Ramezani, T. Khan, N. A. Abbasi, M. Kuscu, "Fundamentals of Molecular Information and Communication Science," Proceedings of the IEEE, vol. 105, no. 2, pp. 306-318, February 2017.

30. N. A. Abbasi, B. A. Bilgin, O. B. Akan, "The Nervous NaNoNetwork Simulator N4Sim for Molecular Communication in Nervous System," 2017.

29. M. Kuscu, O. B. Akan, "Modeling and Analysis of SiNW FET-Based Molecular Communication Receiver," IEEE Transactions on Communications, vol. 64, no. 9, pp. 3708-3721, September 2016.

28. M. Kuscu, O. B. Akan, "On the Capacity of Diffusion-Based Molecular Communications with SiNW FET-Based Receiver," in Proc. IEEE EMBC 2016, Orlando, FL, USA, August 2016.

27. M. Kuscu, O. B. Akan, "On the Physical Design of Molecular Communication Receiver Based on Nanoscale Biosensors," IEEE Sensors Journal, vol. 16, no. 8, pp. 2228-2243, April 2016.

26. G. Reali, M. Femminella, L. Felicetti, A. Davy, R. C. Fuentes, A. Cabellos-Aparicio, J. Sole-Pareta, E. Alarcon, P. Lio, P. Gresele, M. Malvestiti, W. Tavernier, Y. Koucheryavy, V. Petrov, S. Balasubramaniam, O. B. Akan, "A Survey of Simulation Tools for Molecular Communications and their Multi-Scale Integration," 2016.

25. N. A. Abbasi, O. B. Akan, "A Queueing-Theoretical Delay Analysis for Intra-body Nervous Nanonetworks," Nano Communication Networks Journal (Elsevier), vol. 6, no. 4, pp. 166-177, December 2015.

24. M. Kuscu, O. B. Akan, "Modeling and Analysis of SiNW BioFET as Molecular Antenna for Bio-Cyber Interfaces towards the Internet of Bio-NanoThings," in Proc. IEEE WF-IoT 2015, Milan, Italy, December 2015.

23. H. Ramezani, O. B. Akan, "Synaptic Channel Model Including Effects of Spike Width Variation," in Proc. ACM NANOCOM 2015, Boston, MA, USA, September 2015.

22. D. Malak, H. Ramezani, M. Kocaoglu, O. B. Akan, "Diversity in Diffusion-based Molecular Communication Channel with Drift," in Proc. IEEE ICC 2016, Kuala Lumpur, Malaysia, June 2016.

21. D. Malak, O. B. Akan, "Communication Theoretical Understanding of Intra-body Nervous Nanonetworks," IEEE Communications Magazine, vol. 52, no. 4, pp. 129-135, April 2014.

20. D. Kilinc, O. B. Akan, "Receiver Design for Molecular Communication," IEEE Journal on Selected Areas in Communications (JSAC), vol. 31, no. 12, pp. 705-714, December 2013.

19. D. Malak, M. Kocaoglu, O. B. Akan, "Communication Theoretic Analysis of Synaptic Channel for Cortical Neurons," Nano Communication Networks Journal (Elsevier), vol. 4, no. 3, pp. 131-141, September 2013.

18. B. D. Unluturk, E. B. Pehlivanoglu, O. B. Akan, "Molecular Channel Model with Multiple-Bit Carrying Molecules," in Proc. IEEE BlackSeaCom 2013, Batumi, Georgia, July 2013.

17. D. Malak, O. B. Akan, "A Communication Theoretical Analysis of Synaptic Multiple-Access Channel in Hippocampal-Cortical Neurons," IEEE Transactions on Communications, vol. 61, no. 6, pp. 2457-2467, June 2013.

16. D. Malak, O. B. Akan, "Synaptic Interference Channel," in Proc. IEEE MoNaCom 2013 (in conjunction with IEEE ICC 2013), Budapest, Hungary, June 2013.

15. E. Balevi, O. B. Akan, "A Physical Channel Model for Nanoscale Neuro-Spike Communication," IEEE Transactions on Communications, vol. 61, no. 3, pp. 1178-1187, March 2013.

14. B. D. Unluturk, D. Malak, O. B. Akan, "Rate-Delay Tradeoff with Network Coding in Molecular Nanonetworks," IEEE Transactions on Nanotechnology, vol. 12, no. 2, pp. 120-128, March 2013.

13. D. Kilinc, O. B. Akan, "An Information Theoretical Analysis of Nanoscale Molecular Gap Junction Communication Channel Between Cardiomyocytes," IEEE Transactions on Nanotechnology, vol. 12, no. 2, pp. 129-136, March 2013.

12. B. Atakan, S. Galmes, O. B. Akan, "Nanoscale Communication with Molecular Arrays in Nanonetworks," IEEE Transactions on Nanobioscience, vol. 11, no. 2, pp. 149-160, June 2012.

11. D. Malak, O. B. Akan, "Molecular Communication Nanonetworks inside Human Body," Nano Communication Networks Journal (Elsevier), vol.3, no.1, pp. 19-35, March 2012.

10. A. Guney, B. Atakan, O. B. Akan, "Mobile Ad Hoc Nanonetworks with Collision-based Molecular Communication," IEEE Transactions on Mobile Computing, vol. 11, no. 3, pp. 353-266, March 2012.

9. B. Atakan, S. Balasubramaniam, O. B. Akan, "Body Area NanoNetworks with Molecular Communications in Nanomedicine," IEEE Communications Magazine, vol. 50, no. 1, pp. 28-34, January 2012.

8. F. Dressler, O. B. Akan, "Bio-inspired Networking: From Theory to Practice," IEEE Communications Magazine, vol. 48, no. 11, pp. 176-183, November 2010.

7. E. Gul, B. Atakan, O. B. Akan, "NanoNS: A Nanoscale Network Simulator Framework for Molecular Communications," Nano Communication Networks Journal (Elsevier), vol. 1, no. 2, pp. 138-156, June 2010.

6. F. Dressler, O. B. Akan, "A Survey on Bio-inspired Networking," Computer Networks Journal (Elsevier), vol. 54, no. 6, pp. 881-900, April 2010.

5. B. Atakan, O. B. Akan, "Deterministic Capacity of Information Flow in Molecular Nanonetworks," Nano Communication Networks Journal (Elsevier), vol. 1, no. 1, pp. 31-42, March 2010.

4. B. Atakan, O. B. Akan, "Single and Multiple-Access Channel Capacity in Molecular Nanonetworks," in Proc. ICST/ACM Nano-Net 2009, Luzern, Switzerland, October 2009.

3. B. Atakan, O. B. Akan, "On Molecular Multiple-Access, Broadcast and Relay Channels in Nanonetworks," in Proc. ICST/ACM BIONETICS 2008, Hyogo, Japan, November 2008.

2. B. Atakan, O. B. Akan, "On Channel Capacity and Error Compensation in Molecular Communication," in Springer Transactions on Computational Systems Biology, vol. 10, pp. 59-80, February 2008.

1. B. Atakan, O. B. Akan, "An Information Theoretical Approach for Molecular Communication," in Proc. ICST/ACM BIONETICS 2007, Budapest, Hungary, December 2007.